Common repeats identified between NC_022714.1 and NC_036024.1
*Length of motif with flanking sequences
| Query (NC_022714.1) | Subject (NC_036024.1) | Blast Results | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| S. No. | Motif | Motif Length | Start-End | Length* | Motif | Motif Length | Start-End | Length* | Percent identity | Alignment length | E-Value | Bit score |
| 1. | (ATTC)3 | 12 | 109207 - 109218 | 412 | (ATTC)3 | 12 | 322668 - 322679 | 412 | 100.000 | 410 | 0.0 | 758 |
| 2. | (ATT)4 | 12 | 113436 - 113447 | 412 | (ATT)4 | 12 | 233765 - 233776 | 412 | 98.462 | 325 | 1.24e-167 | 571 |
| 3. | (ATT)4 | 12 | 113436 - 113447 | 412 | (ATT)4 | 12 | 339256 - 339267 | 412 | 99.755 | 408 | 0.0 | 747 |
| 4. | (TA)6 | 12 | 12106 - 12117 | 412 | (TA)6 | 12 | 251147 - 251158 | 412 | 100.000 | 408 | 0.0 | 754 |
| 5. | (TATT)3 | 12 | 124000 - 124011 | 412 | (TATT)3 | 12 | 349817 - 349828 | 412 | 100.000 | 410 | 0.0 | 758 |
| 6. | (TA)6 | 12 | 125414 - 125425 | 412 | (TA)6 | 12 | 351231 - 351242 | 412 | 99.512 | 410 | 0.0 | 747 |
| 7. | (CA)6 | 12 | 128223 - 128234 | 412 | (CA)6 | 12 | 354041 - 354052 | 412 | 99.756 | 410 | 0.0 | 752 |
| 8. | (TA)6 | 12 | 250026 - 250037 | 412 | (TA)6 | 12 | 300640 - 300651 | 412 | 100.000 | 410 | 0.0 | 758 |
| 9. | (TA)6 | 12 | 250026 - 250037 | 412 | (TA)6 | 12 | 395907 - 395918 | 412 | 100.000 | 309 | 1.24e-167 | 571 |
| 10. | (TA)6 | 12 | 250026 - 250037 | 412 | (TA)6 | 12 | 58942 - 58953 | 412 | 100.000 | 408 | 0.0 | 754 |
| 11. | (AATG)3 | 12 | 252622 - 252633 | 412 | (AATG)3 | 12 | 303236 - 303247 | 412 | 99.756 | 410 | 0.0 | 752 |
| 12. | (AATG)3 | 12 | 253873 - 253884 | 412 | (AATG)3 | 12 | 304487 - 304498 | 412 | 100.000 | 410 | 0.0 | 758 |
| 13. | (TTCCAA)3 | 18 | 288642 - 288659 | 418 | (TTCCAA)3 | 18 | 170610 - 170627 | 418 | 99.561 | 228 | 6.32e-121 | 416 |
| 14. | (AGAA)3 | 12 | 290848 - 290859 | 412 | (AGAA)3 | 12 | 380871 - 380882 | 412 | 99.756 | 410 | 0.0 | 750 |
| 15. | (TCTTAT)4 | 24 | 303527 - 303550 | 424 | (TCTTAT)4 | 24 | 9939 - 9962 | 424 | 100.000 | 422 | 0.0 | 780 |
| 16. | (TTGA)3 | 12 | 304091 - 304102 | 412 | (TTGA)3 | 12 | 10503 - 10514 | 412 | 100.000 | 410 | 0.0 | 758 |
| 17. | (TTCC)3 | 12 | 305650 - 305661 | 412 | (TTCC)3 | 12 | 12056 - 12067 | 412 | 100.000 | 410 | 0.0 | 758 |
| 18. | (TA)7 | 14 | 329901 - 329914 | 414 | (TA)7 | 14 | 431638 - 431651 | 414 | 100.000 | 410 | 0.0 | 758 |
| 19. | (ACCAT)3 | 15 | 364850 - 364864 | 415 | (ACCAT)3 | 15 | 362371 - 362385 | 415 | 100.000 | 413 | 0.0 | 763 |
| 20. | (TGGAT)3 | 15 | 385206 - 385220 | 415 | (TGGAT)3 | 15 | 179100 - 179114 | 415 | 99.758 | 413 | 0.0 | 756 |
| 21. | (TGGAT)3 | 15 | 385206 - 385220 | 415 | (TGGAT)3 | 15 | 270996 - 271010 | 415 | 99.758 | 413 | 0.0 | 756 |
| 22. | (ATTC)4 | 16 | 385614 - 385629 | 416 | (ATTC)4 | 16 | 179508 - 179523 | 416 | 99.758 | 414 | 0.0 | 760 |
| 23. | (ATTC)4 | 16 | 385614 - 385629 | 416 | (ATTC)4 | 16 | 271404 - 271419 | 416 | 99.758 | 414 | 0.0 | 760 |
| 24. | (TAG)4 | 12 | 387615 - 387626 | 412 | (TAG)4 | 12 | 273405 - 273416 | 412 | 99.756 | 410 | 0.0 | 752 |
| 25. | (AATAG)3 | 15 | 390576 - 390590 | 415 | (AATAG)3 | 15 | 276367 - 276381 | 415 | 100.000 | 413 | 0.0 | 763 |
| 26. | (ACGCTA)3 | 18 | 392635 - 392652 | 418 | (ACGCTA)3 | 18 | 278427 - 278444 | 418 | 99.760 | 416 | 0.0 | 763 |
| 27. | (TGATTA)3 | 18 | 399660 - 399677 | 418 | (TGATTA)3 | 18 | 285450 - 285467 | 418 | 100.000 | 416 | 0.0 | 769 |
| 28. | (TTTC)3 | 12 | 407164 - 407175 | 412 | (TTTC)3 | 12 | 292954 - 292965 | 412 | 100.000 | 410 | 0.0 | 758 |
| 29. | (GCT)4 | 12 | 40870 - 40881 | 412 | (GCT)4 | 12 | 114136 - 114147 | 412 | 100.000 | 410 | 0.0 | 758 |
| 30. | (TA)6 | 12 | 414850 - 414861 | 412 | (TA)6 | 12 | 300640 - 300651 | 412 | 100.000 | 410 | 0.0 | 758 |
| 31. | (TA)6 | 12 | 414850 - 414861 | 412 | (TA)6 | 12 | 395907 - 395918 | 412 | 100.000 | 309 | 1.24e-167 | 571 |
| 32. | (TA)6 | 12 | 414850 - 414861 | 412 | (TA)6 | 12 | 58942 - 58953 | 412 | 100.000 | 408 | 0.0 | 754 |
| 33. | (AATG)3 | 12 | 417446 - 417457 | 412 | (AATG)3 | 12 | 303236 - 303247 | 412 | 99.756 | 410 | 0.0 | 752 |
| 34. | (AATG)3 | 12 | 418697 - 418708 | 412 | (AATG)3 | 12 | 304487 - 304498 | 412 | 100.000 | 410 | 0.0 | 758 |
| 35. | (GTT)4 | 12 | 425712 - 425723 | 412 | (GTT)4 | 12 | 325933 - 325944 | 412 | 100.000 | 410 | 0.0 | 758 |
| 36. | (TCTCT)3 | 15 | 426632 - 426646 | 415 | (TCTCT)3 | 15 | 326853 - 326867 | 415 | 100.000 | 413 | 0.0 | 763 |
| 37. | (CAAC)3 | 12 | 427413 - 427424 | 412 | (CAAC)3 | 12 | 327634 - 327645 | 412 | 99.756 | 410 | 0.0 | 752 |
| 38. | (CTTT)3 | 12 | 43394 - 43405 | 412 | (CTTT)3 | 12 | 116660 - 116671 | 412 | 100.000 | 410 | 0.0 | 758 |
| 39. | (GGTG)3 | 12 | 46216 - 46227 | 412 | (GGTG)3 | 12 | 119482 - 119493 | 412 | 97.805 | 410 | 0.0 | 704 |
| 40. | (TAGC)3 | 12 | 66939 - 66950 | 412 | (TAGC)3 | 12 | 140195 - 140206 | 412 | 100.000 | 410 | 0.0 | 758 |
| 41. | (GGAG)3 | 12 | 70885 - 70896 | 412 | (GGAG)3 | 12 | 144141 - 144152 | 412 | 100.000 | 410 | 0.0 | 758 |
| 42. | (TAT)4 | 12 | 72813 - 72824 | 412 | (TAT)4 | 12 | 146069 - 146080 | 412 | 99.510 | 408 | 0.0 | 741 |
| 43. | (TAT)5 | 15 | 80295 - 80309 | 415 | (TAT)5 | 15 | 153548 - 153562 | 415 | 100.000 | 413 | 0.0 | 763 |
| 44. | (TA)6 | 12 | 87182 - 87193 | 412 | (TA)6 | 12 | 300640 - 300651 | 412 | 100.000 | 410 | 0.0 | 758 |
| 45. | (TA)6 | 12 | 87182 - 87193 | 412 | (TA)6 | 12 | 395907 - 395918 | 412 | 100.000 | 309 | 1.24e-167 | 571 |
| 46. | (TA)6 | 12 | 87182 - 87193 | 412 | (TA)6 | 12 | 58942 - 58953 | 412 | 100.000 | 408 | 0.0 | 754 |
| 47. | (AATG)3 | 12 | 89778 - 89789 | 412 | (AATG)3 | 12 | 303236 - 303247 | 412 | 99.756 | 410 | 0.0 | 752 |
| 48. | (AATG)3 | 12 | 91029 - 91040 | 412 | (AATG)3 | 12 | 304487 - 304498 | 412 | 100.000 | 410 | 0.0 | 758 |
| 49. | (TTCAT)3 | 15 | 96769 - 96783 | 415 | (TTCAT)3 | 15 | 310228 - 310242 | 415 | 99.274 | 413 | 0.0 | 745 |