S.No.	Authors	Title	Journal	Volume	Pages	Year
1	#Meenakshi S, Iyer#Rao, Madan#Mayor, Satyajit#Sowdhamini, Ramanathan	A census of actin-associated proteins in humans	Frontiers in Cell and Developmental Biology	11		2023
2	#Tiwari, Vikas#Sowdhamini, R.	Structure modelling of odorant receptor from Aedes aegypti and identification of potential repellent molecules	Computational and Structural Biotechnology Journal	21	2204	2023
3	#Joshi, Adwait#P, Praveen#Ramakrishnan, Uma#Sowdhamini, Ramanathan	Draft genome sequence of an invasive plant Lantana camara L.	Bioinformation	18		2022
4	#Bhattacharyya, Teerna#Ghosh, Avishek#Verma, Shailya#Raghu, Padinjat#Sowdhamini, Ramanathan	Structural rationale to understand the effect of disease-associated mutations on Myotubularin	Current Research in Structural Biology	5	100100	2023
5	#Chauhan, Pankaj Kumar#Sowdhamini, R.	Computational analysis of the flexibility in the disordered linker region connecting LIM domains in cysteine–glycine-rich protein	Frontiers in Genetics	14		2023
6	#Tiwari, Vikas#Sowdhamini, R.	Structural modelling and dynamics of full-length of TLR10 sheds light on possible modes of dimerization, ligand binding and mechanism of action	Current Research in Structural Biology	5	100097	2023
7	#Sharma, Abhishek#Krishna, Sudhir#Sowdhamini, Ramanathan	Bioinformatics Analysis of Mutations Sheds Light on the Evolution of Dengue NS1 Protein With Implications in the Identification of Potential Functional and Druggable Sites	Molecular Biology and Evolution	40	msad033	2023
8	#Mam, Bhavika#Karpe, Snehal D.#Sowdhamini, Ramanathan	Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees	Apidologie	54	12	2023
9	#Chauhan, Pankaj Kumar#Sowdhamini, Ramanathan	Integrative network analysis interweaves the missing links in cardiomyopathy diseasome	Scientific Reports	12	19670	2022
10	#Shafi, K. Mohamed#Sajeevan, Radha Sivarajan#Kouser, Sania#Vishnuprasad, Chethala N.#Sowdhamini, Ramanathan	Transcriptome profiling of two Moringa species and insights into their antihyperglycemic activity	BMC Plant Biology	22	561	2022
11	#Bheemireddy, Sneha#Sandhya, Sankaran#Srinivasan, Narayanaswamy#Sowdhamini, Ramanathan	Computational tools to study RNA-protein complexes	Frontiers in Molecular Biosciences	9		2022
12	#Kalmankar, Neha V.#Gehi, Bhuvaneshwari Rajendrakumar#Sowdhamini, Ramanathan	Effects of a plant cyclotide on conformational dynamics and destabilization of β-amyloid fibrils through molecular dynamics simulations	Frontiers in Molecular Biosciences	9		2022
13	#Naveenkumar, Nagarajan#Prabantu, Vasam Manjveekar#Vishwanath, Sneha#Sowdhamini, Ramanathan#Srinivasan, Narayanaswamy	Structures of distantly related interacting protein homologs are less divergent than non-interacting homologs	FEBS Open Bio	12	2147	2022
14	#Verma, Shailya#Sowdhamini, Ramanathan	A genome-wide search of Toll/Interleukin-1 receptor (TIR) domain-containing adapter molecule (TICAM) and their evolutionary divergence from other TIR domain containing proteins	Biology Direct	17	24	2022
15	#Naika, Mahantesha B. N.#Sathyanarayanan, Nitish#Sajeevan, Radha Sivarajan#Bhattacharyya, Teerna#Ghosh, Pritha#Iyer, Meenakshi S.#Jarjapu, Mahita#Joshi, Adwait G.#Harini, K.#Shafi, K. Mohamed#Kalmankar, Neha#Karpe, Snehal D.#Mam, Bhavika#Pasha, Shaik Naseer#Sowdhamini, Ramanathan	Exploring the medicinally important secondary metabolites landscape through the lens of transcriptome data in fenugreek (Trigonella foenum graecum L.)	Scientific Reports	12	13534	2022
16	#Shafi, K. Mohamed#Sowdhamini, Ramanathan	Computational analysis of potential candidate genes involved in the cold stress response of ten Rosaceae members	BMC Genomics	23	516	2022
17	#Bhattacharyya, Teerna#Nayak, Soumya#Goswami, Smit#Gadiyaram, Vasundhara#Mathew, Oommen K#Sowdhamini, Ramanathan	PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe	Database	2022	baac025	2022
18	#Kalmankar, Neha V#Pavalam, Murugavel#Indrakumar, Sowmya#Srinivasan, Narayanaswamy#Sowdhamini, Ramanathan	DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins	Database	2022	baac005	2022
19	#Chauhan, Pankaj Kumar#Sowdhamini, Ramanathan	LIM domain-wide comprehensive virtual mutagenesis provides structural rationale for cardiomyopathy mutations in CSRP3	Scientific Reports	12	3562	2022
20	#Sankaradoss, Arun#Jagtap, Suraj#Nazir, Junaid#Moula, Shefta E.#Modak, Ayan#Fialho, Joshuah#Iyer, Meenakshi#Shastri, Jayanthi S.#Dias, Mary#Gadepalli, Ravisekhar#Aggarwal, Alisha#Vedpathak, Manoj#Agrawal, Sachee#Pandit, Awadhesh#Nisheetha, Amul#Kumar, Anuj#Bordoloi, Mahasweta#Shafi, Mohamed#Shelar, Bhagyashree#Balachandra, Swathi S.#Damodar, Tina#Masika, Moses Muia#Mwaura, Patrick#Anzala, Omu#Muthumani, Kar#Sowdhamini, Ramanathan#Medigeshi, Guruprasad R.#Roy, Rahul#Pattabiraman, Chitra#Krishna, Sudhir#Sreekumar, Easwaran	Immune profile and responses of a novel dengue DNA vaccine encoding an EDIII-NS1 consensus design based on Indo-African sequences	Special issue on emerging diseases	30	2058	2022
21	#Pulipati, Shalini#Somasundaram, Suji#Rana, Nitika#Kumaresan, Kavitha#Shafi, Mohamed#Civáň, Peter#Sellamuthu, Gothandapani#Jaganathan, Deepa#Ramaravi, Prasanna Venkatesan#Punitha, S.#Raju, Kalaimani#Mantri, Shrikant S.#Sowdhamini, R.#Parida, Ajay#Venkataraman, Gayatri	Diversity of Sodium Transporter HKT1;5 in Genus Oryza	Rice Science	29	31	2022
22	#Harini, K#Jayashree, S#Tiwari, Vikas#Vishwanath, Sneha#Sowdhamini, Ramanathan	Ligand Docking Methods to Recognize Allosteric Inhibitors for G-Protein-Coupled Receptors	Bioinform Biol Insights	15	11779322211037769	2021
23	#Juma, Meshack#Sankaradoss, Arun#Ndombi, Redcliff#Mwaura, Patrick#Damodar, Tina#Nazir, Junaid#Pandit, Awadhesh#Khurana, Rupsy#Masika, Moses#Chirchir, Ruth#Gachie, John#Krishna, Sudhir#Sowdhamini, Ramanathan#Anzala, Omu#Meenakshi, Iyer S.	Antimicrobial Resistance Profiling and Phylogenetic Analysis of Neisseria gonorrhoeae Clinical Isolates From Kenya in a Resource-Limited Setting	Frontiers in Microbiology	12		2021
24	#Bhattacharyya, Teerna#Sowdhamini, Ramanathan	Genome-wide survey of tyrosine phosphatases in thirty mammalian genomes	Cellular Signalling	84	110009	2021
25	#Ahmed, Asad#Mam, Bhavika#Sowdhamini, Ramanathan	DEELIG: A Deep Learning Approach to Predict Protein-Ligand Binding Affinity	Bioinform Biol Insights	15	11779322211030364	2021