S.No.	Authors	Title	Journal	Volume	Pages	Year
1	#Chakraborty, Shuvechha#Askari, Mehdi#Barai, Ram Shankar#Idicula-Thomas, Susan	PBITV3 : A robust and comprehensive tool for screening pathogenic proteomes for drug targets and prioritizing vaccine candidates	Protein science: a publication of the Protein Society	33	e4892	2024
2	#Rahate, Kshitija#Arshi, Anam#Barai, Ram Shankar#Chakraborty, Shuvechha#Idicula-Thomas, Susan	EpiCandIn: An open online resource for epidemiology of Candida infections in India	The Indian journal of medical research	159	576-580	2024
3	#Fandilolu, Prayagraj#Kumar, Chandan#Palia, Dushyant#Idicula-Thomas, Susan	Investigating role of positively selected genes and mutation sites of ERG11 in drug resistance of Candida albicans	Archives of microbiology	206	437	2024
4	#Tharayil, Samia Palat#Rasal, Sayli#Gawde, Ulka#Mukherjee, Srabani#Patil, Anushree#Joshi, Beena#Idicula-Thomas, Susan#Shukla, Pallavi	Relation of mitochondrial DNA copy number and variants with the clinical characteristics of polycystic ovary syndrome	Molecular and cellular endocrinology	594	112386	2024
5	#Rao, Aishwarya#Subedi, Rambhadur#Kundu, Indra#Idicula-Thomas, Susan#Shinde, Uma#Bansal, Vandana#Balsarkar, Geetha#Mayadeo, Niranjan#Das, Dhanjit Kumar#Balasinor, Nafisa#Madan, Taruna	Differential proteomics of circulating extracellular vesicles of placental origin isolated from women with early-onset preeclampsia reveal aberrant innate immune and hemostasis processes	American journal of reproductive immunology	91	e13860	2024
6	#Chakraborty, Shuvechha#Palanikumar, Indumathi#Gune, Yash#Venkatesh, K V#Raman, Karthik#Idicula-Thomas, Susan	An integrated systems biology approach establishes arginine biosynthesis as a metabolic weakness in Candida albicans during host infection	bioRxiv			2025
7	#Chakraborty, Shuvechha#Pawaskar, Ameya#Metkari, Siddhanath#Madan, Taruna#Idicula-Thomas, Susan	Identification and evaluation of besifloxacin as repurposed antifungal drug in combination with fluconazole against Candida albicans	bioRxiv			2025
8	#Kumar, Chandan#Idicula-Thomas, Susan	FSHR activation through small molecule modulators: Mechanistic insights from MD simulations.	Computers in biology and medicine	154	106588	2023
9	#Chakraborty, Shuvechha#Rahate, Kshitija#Kumar, Chandan#Idicula-Thomas, Susan	Expanding the therapeutic options for Candida infections using novel inhibitors of secreted aspartyl proteases.	Drug development research	84	96	2023
10	#Salvi, Rupashree#Kumar, Chandan#Brahmbhatt, Krupanshi#Subedi, Rambhadur#Idicula-Thomas, Susan#Madan, Taruna#Biswas, Barnali	N-Linked Glycosylation in Chinese Hamster Ovary Cells Is Critical for Insulin-like Growth Factor 1 Signaling.	International journal of molecular sciences	23		2022
11	#Gawde, Ulka#Chakraborty, Shuvechha#Waghu, Faiza Hanif#Barai, Ram Shankar#Khanderkar, Ashlesha#Indraguru, Rishikesh#Shirsat, Tanmay#Idicula-Thomas, Susan	CAMPR4: a database of natural and synthetic antimicrobial peptides.	Nucleic acids research	51	D377	2023
12	#Kundu, Indra#Sharma, Mridula#Barai, Ram Shankar#Pokar, Khushal#Idicula-Thomas, Susan	GeDiPNet: Online resource of curated gene-disease associations for polypharmacological targets discovery	Genes & Diseases			2022
13	#Beirag, Nazar#Kumar, Chandan#Madan, Taruna#Shamji, Mohamed H#Bulla, Roberta#Mitchell, Daniel#Murugaiah, Valarmathy#Neto, Martin Mayora#Temperton, Nigel#Idicula-Thomas, Susan#Varghese, Praveen M#Kishore, Uday	Human surfactant protein D facilitates SARS-CoV-2 pseudotype binding and entry in DC-SIGN expressing cells, and downregulates spike protein induced inflammation.	Frontiers in immunology	13	960733	2022
14	#Gawde, Ulka#Hegde, Priyanka#Desai, Karishma#Barai, Ram Shankar#Shekhar, Bipin Raj#Das, Dhanjit K#Idicula-Thomas, Susan	Multimorbidity landscape of schizophrenia: Insights from meta-analysis of genome wide association studies.	Schizophrenia research	243	214	2022
15	#Gomatam, Anish#Joseph, Blessy#Gawde, Ulka#Raikuvar, Kavita#Coutinho, Evans	Predicting toxicity of endocrine disruptors and blood–brain barrier permeability using chirality-sensitive descriptors and machine learning	Computational Toxicology	24	100240	2022
16	#Salvi, Rupashree#Gawde, Ulka#Idicula-Thomas, Susan#Biswas, Barnali	Pathway Analysis of Genome Wide Association Studies (GWAS) Data Associated with Male Infertility	Reproductive Medicine	3	235	2022
17	#Aathi, Muthu Sankar#Kumar, Chandan#Prabhudesai, Kaushiki S#Shanmugarajan, Dhivya#Idicula-Thomas, Susan	Mapping of FSHR agonists and antagonists binding sites to identify potential peptidomimetic modulators.	Biochimica et biophysica acta. Biomembranes	1864	183842	2022
18	#Waghu, Faiza Hanif#Desai, Karishma#Srinivasan, Sumana#Prabhudesai, Kaushiki S#Dighe, Vikas#Venkatesh, Kareenhalli V#Idicula-Thomas, Susan	FSHR antagonists can trigger a PCOS-like state.	Systems biology in reproductive medicine	68	129	2022
19	#Varghese, Praveen M#Mukherjee, Shuvechha#Al-Mohanna, Futwan A#Saleh, Souad M#Almajhdi, Fahad N#Beirag, Nazar#Alkahtani, Saad H#Rajkumari, Reena#Nal Rogier, Beatrice#Sim, Robert B#Idicula-Thomas, Susan#Madan, Taruna#Murugaiah, Valarmathy#Kishore, Uday	Human Properdin Released By Infiltrating Neutrophils Can Modulate Influenza A Virus Infection.	Frontiers in immunology	12	747654	2021
20	#Idicula-Thomas, Susan#Gawde, Ulka#Jha, Prabhat	Comparison of machine learning algorithms applied to symptoms to determine infectious causes of death in children: national survey of 18,000 verbal autopsies in the Million Death Study in India.	BMC public health	21	1787	2021