S.No.	Authors	Title	Journal	Volume	Pages	Year
1	#Rai, Akhila Balakrishna#Codi, Jalaluddin Akbar Kandel#Suchitha, Giridhara Prema#Hemavathi, Kadabagere Narayanaswamy#Dagamajalu, Shobha#Abhinand, Chandran S.#Raju, Rajesh#Prasad, Thottethodi Subrahmanya Keshava	Mapping growth differentiation factor-15 (GDF15)-mediated signaling pathways in cancer: insights into its role across different cancer types	Discover Oncology	16		2025
2	#Suchitha, G. P.#Rai, Akhila B.#Pervaje, Ravishankar#Kotimoole, Chinmaya Narayana#Modi, Prashant Kumar#Keshava Prasad, T. S.#Dagamajalu, Shobha	Proteomic analysis reveals anticancer mechanisms of Bhallataka taila in inhibiting lung cancer progression and metastasis	Molecular Omics	21	122	2025
3	#Mallick, Sumit#Narayana, Vanya Kadla#Rai, Akhila Balakrishna#Upadhyay, Shubham Sukerndeo#Prasad, Thottethodi Subrahmanya Keshava#P, Sudheer Shenoy#Bose, Bipasha	Hematopoietic stem cell conditioned media induces apoptosis in colorectal cancer stem cells via dysregulation of HSP90 and 26S proteasome system.	The international journal of biochemistry & cell biology		106773	2025
4	#Bhat, Sowrabha#Narayana, Vanya Kadla#Prasad, T. S.Keshava	Metabolomics studies in cushing’s syndrome: recent developments and perspectives	Expert Review of Proteomics			2025
5	#Amrutha, S.#Abhinand, Chandran S.#Upadhyay, Shubham Sukerndeo#Parvaje, Ravishankar#Prasad, Thottethodi Subrahmanya Keshava#Modi, Prashant Kumar	Network pharmacology and metabolomics analysis of Tinospora cordifolia reveals BACE1 and MAOB as potential therapeutic targets for neuroprotection in Alzheimer’s disease	Scientific Reports	15	8103	2025
6	#Vasishta, Sampara#Ammankallu, Shruthi#Poojary, Ganesha#Gomes, Sarah Michael#Ganesh, Kailash#Umakanth, Shashikiran#Adiga, Prashanth#Upadhya, Dinesh#Prasad, Thottethodi Subrahmanya Keshava#Joshi, Manjunath B.	High glucose induces DNA methyltransferase 1 dependent epigenetic reprogramming of the endothelial exosome proteome in type 2 diabetes	International Journal of Biochemistry and Cell Biology	176		2024
7	#Palollathil, Akhina#Nandakumar, Revathy#Ahmed, Mukhtar#Velikkakath, Anoop Kumar G.#Nisar, Mahammad#Nisar, Muhammad#Devasahayam Arokia Balaya, Rex#Parate, Sakshi Sanjay#Hanehalli, Vidyarashmi#Mahin, Althaf#Mathew, Rohan Thomas#Shetty, Rohan#Codi, Jalaluddin Akbar Kandel#Revikumar, Amjesh#Vijayakumar, Manavalan#Prasad, Thottethodi Subrahmanya Keshava#Raju, Rajesh	HNCDrugResDb: a platform for deciphering drug resistance in head and neck cancers	Scientific Reports	14		2024
8	#Vasishta, Sampara#Ammankallu, Shruthi#Umakanth, Shashikiran#Keshava Prasad, Thottethodi Subrahmanya#Joshi, Manjunath B.	DNA methyltransferase isoforms regulate endothelial cell exosome proteome composition	Biochimie	223	98	2024
9	#Parate, Sakshi Sanjay#Upadhyay, Shubham Sukerndeo#S, Amrutha#Karthikkeyan, Gayathree#Pervaje, Ravishankar#Abhinand, Chandran S.#Modi, Prashant Kumar#Prasad, Thottethodi Subrahmanya Keshava	Comparative Metabolomics and Network Pharmacology Analysis Reveal Shared Neuroprotective Mechanisms of Bacopa monnieri (L.) Wettst and Centella asiatica (L.) Urb	Molecular Neurobiology	61		2024
10	#Aravind, Anjana#Nandakumar, Revathy#Ahmed, Mukhtar#Nisar, Mahammad#Palollathil, Akhina#Kanichery, Anagha#Sreelan, Sourav#Sinan, K. P.Munavvar#Balaya, Rex Devasahayam Arokia#Vijayakumar, Manavalan#Prasad, Thottethodi Subrahmanya Keshava#Raju, Rajesh	REMEMProt: a resource of membrane-enriched proteome profiles, their disease associations, and biomarker status	Life Science Alliance	7		2024
11	#Aziz, Raifa Abdul#Ramesh, Poornima#Suchithra, Kokkarambath Vannadil#Stothard, Paul#Narayana, Vanya Kadla#Raghu, Shamprasad Varija#Shen, Fo Ting#Young, Chiu Chung#Prasad, T. S.Keshava#Hameed, Asif	Comprehensive insights into the impact of bacterial indole-3-acetic acid on sensory preferences in Drosophila melanogaster	Scientific Reports	14		2024
12	#Gupta, Pragya#Goswami, Sangam Giri#Kumari, Geeta#Saravanakumar, Vinodh#Bhargava, Nupur#Rai, Akhila Balakrishna#Singh, Praveen#Bhoyar, Rahul C.#Arvinden, V. R.#Gunda, Padma#Jain, Suman#Narayana, Vanya Kadla#Deolankar, Sayali C.#Prasad, T. S.Keshava#Natarajan, Vivek T.#Scaria, Vinod#Singh, Shailja#Ramalingam, Sivaprakash	Development of pathophysiologically relevant models of sickle cell disease and β-thalassemia for therapeutic studies	Nature Communications	15		2024
13	#Devasahayam Arokia Balaya, Rex#Palollathil, Akhina#Kumar, Sumaithangi Thattai Arun#Chandrasekaran, Jaikanth#Upadhyay, Shubham Sukerndeo#Parate, Sakshi Sanjay#Sajida, M.#Karthikkeyan, Gayathree#Prasad, Thottethodi Subrahmanya Keshava	Role of Hemigraphis alternata in wound healing: metabolomic profiling and molecular insights into mechanisms	Scientific Reports	14		2024
14	#Shaji, Vineetha#Dagamajalu, Shobha#Sanjeev, Diya#George, Mejo#Kanekar, Saptami#Prasad, Ganesh#Prasad, Thottethodi Subrahmanya Keshava#Raju, Rajesh#Balaya, Rex Devasahayam Arokia	Deciphering the Receptor-Mediated Signaling Pathways of Interleukin-19 and Interleukin-20	Journal of Interferon and Cytokine Research	44		2024
15	#DasGupta, Mohua#Kumaresan, Arumugam#Saraf, Kaustubh Kishor#Paul, Nilendu#Sajeevkumar, Thankappan#Karthikkeyan, Gayathree#Prasad, TS Keshava#Modi, Prashant Kumar#Ramesha, Kerekoppa#Manimaran, Ayyasamy	Deciphering metabolomic alterations in seminal plasma of crossbred (Bos taurus X Bos indicus) bulls through comparative deep metabolomic analysis	Andrologia	54	e14253	2022
16	#Dasgupta, Mohua#Kumaresan, Arumugam#Saraf, Kaustubh Kishor#Nag, Pradeep#Sinha, Manish Kumar#Aslam MK, Muhammad#Karthikkeyan, Gayathree#Prasad, TS#Modi, Prashant Kumar#Datta, Tirtha Kumar	Deep metabolomic profiling reveals alterations in fatty acid synthesis and ketone body degradations in spermatozoa and seminal plasma of astheno-oligozoospermic bulls	Frontiers in Veterinary Science	8	1553	2022
17	#Awasthi, Kriti#Kootimole, Chinmaya Narayana#Aravind, Anjana#Prasad, Thottethodi Subrahmanya Keshava	Data-Independent Acquisition Approach to Proteome: A Case Study and a Spectral Library for Mass Spectrometry-Based Investigation of Mycobacterium tuberculosis	OMICS: A Journal of Integrative Biology	26	142	2022
18	#Subba, Pratigya#Saha, Pallabi#Karthikkeyan, Gayathree#Biswas, Mousumi#Prasad, Thottethodi Subrahmanya Keshava#Roy‐Barman, Subhankar	Metabolite profiling reveals overexpression of the global regulator, MoLAEA leads to increased synthesis of metabolites in Magnaporthe oryzae	Journal of Applied Microbiology	132	3825	2022
19	#Nekrakalaya, Bhagya#Arefian, Mohammad#Kotimoole, Chinmaya Narayana#Krishna, Rajesh Muliyar#Palliyath, Gangaraj Karyath#Najar, Mohammad Altaf#Behera, Santosh Kumar#Kasaragod, Sandeep#Santhappan, Paulraj#Hegde, Vinayaka	Towards Phytopathogen Diagnostics? Coconut Bud Rot Pathogen Phytophthora palmivora Mycelial Proteome Analysis Informs Genome Annotation	OMICS: A Journal of Integrative Biology	26	189	2022
20	#Ashwitha, A#Ramesha, Kerekoppa P#Ramesh, Poornima#Kootimole, Chinmaya Narayana#Devadasan, M Joel#Ammankallu, Shruthi#Jeyakumar, Sakthivel#Kumaresan, Arumugam#Veerappa, Vedamurthy Gowdar#Das, DN	Quantitative proteomics profiling of spermatozoa and seminal plasma reveals proteins associated with semen quality in Bos indicus bulls	Journal of Proteomics	273	104794	2023
21	#Mol, Praseeda#Balaya, Rex Devasahayam Arokia#Dagamajalu, Shobha#Babu, Sreeranjini#Chandrasekaran, Pavithra#Raghavan, Reshma#Suresh, Sneha#Ravishankara, Namitha#Raju, Anu Hemalatha#Nair, Bipin	A network map of GDNF/RET signaling pathway in physiological and pathological conditions	Journal of Cell Communication and Signaling		1	2023
22	#Abhinand, Chandran S#Galipon, Josephine#Mori, Masaru#Ramesh, Poornima#Prasad, Thottethodi Subrahmanya Keshava#Raju, Rajesh#Sudhakaran, Perumana R#Tomita, Masaru	Temporal phosphoproteomic analysis of VEGF-A signaling in HUVECs: an insight into early signaling events associated with angiogenesis	Journal of Cell Communication and Signaling		1	2023
23	#Kotimoole, Chinmaya Narayana#Antil, Neelam#Kasaragod, Sandeep#Behera, Santosh Kumar#Arvind, Anjana#Reiling, Norbert#Flo, Trude Helen#Prasad, Thottethodi Subrahmanya Keshava	Development of a spectral library for the discovery of altered genomic events in Mycobacterium avium associated with virulence using mass spectrometry-based proteogenomic analysis	Molecular & Cellular Proteomics		100533	2023
24	#Upadhyay, Shubham Sukerndeo#Devasahayam Arokia Balaya, Rex#Parate, Sakshi Sanjay#Dagamajalu, Shobha#Keshava Prasad, TS#Shetty, Rohan#Raju, Rajesh	An assembly of TROP2-mediated signaling events	Journal of Cell Communication and Signaling		1	2023
25	#Devasahayam Arokia Balaya, Rex#Chandrasekaran, Jaikanth#Kanekar, Saptami#Kumar Modi, Prashant#Dagamajalu, Shobha#Gopinathan, Kirthika#Raju, Rajesh#Prasad, TS Keshava	Calcium/calmodulin-dependent protein kinase kinase 2 (CAMKK2) inhibitors: a novel approach in small molecule discovery	Journal of Biomolecular Structure and Dynamics		1	2023
26	Karthikkeyan, Gayathree, Behera, Santosh Kumar, Upadhyay, Shubham Sukerndeo, Pervaje, Ravishankar, Prasad, Thottethodi Subrahmanya Keshava, Modi, Prashant Kumar	Metabolomics analysis highlights Yashtimadhu (Glycyrrhiza glabra L.)‐mediated neuroprotection in a rotenone‐induced cellular model of Parkinson's disease by restoring the mTORC1‐AMPK1 axis in autophagic regulation	Phytotherapy Research		2207	2022