FastQCFastQC Report
Thu 21 Dec 2017
454_SRR073599.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename454_SRR073599.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125000
Sequences flagged as poor quality0
Sequence length44-2042
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGTAGGCAAATGTAAGACTAAGGTTGGGTCTTGCTGGAGGAGTTTT2560.20479999999999998No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.6)